During Clark's battle with the last Phantom Zone wraith, Lex is rescued by a mysterious woman. Chloe is declared dead in the ER, while Lois goes to Lex's manor to find out what experiments he was conducting at the dam.
Clark and Lois meet Smallville's newest arrival face-to-face, and she has some surprising news. Clark decides to leave Smallville and continue with his superhero training but Jor-El informs him that a new Kryptonian menace has arisen.
Kara takes to life in Smallville by entering the Miss Sweet Corn Pageant as a contestant, overruling Clark's objections. However, Lex takes an interest in her and three of the other contestants discover she has super-powers and decide to use her to steal a valuable time capsule.
Dr. Curtis Knox says he can "cure" someone from being a "meteor freak," changing their lives. Chloe takes an interest in this, but Dr. Knox may have another secret. Meanwhile, Kara makes an alliance with Jimmy while Lana secretly watches Lex.
When a movie is shot in Smallville, Clark is forced to secretly use his powers to save someone from a runaway car... but somebody is looking and becomes Clark's biggest fan. Meanwhile, Lionel's fate is revealed.
Kara goes to Washington to look for her missing crystal, but is captured after she breaks into the lab. She's interrogated with a memory-revealing serum that has kryptonite in it, which makes her relive a trip to Earth from the past. In this past trip she followed Lara, Clark's biological mother, to the Kents' farm.
Lana absorbs Clark's powers during a lightning storm, which she uses to break into Lex's safe and steal some incriminating evidence. After being turned away by Grant at the Daily Planet, who won't accept her stolen evidence, Lana goes after Lex herself. Clark tries to rescue Lex, but must first battle the super-powered Lana.
Clark hears his mother's voice trapped in Kara's crystal, and releases her. She gives him Jor-El's ring made of Blue Kryptonite, which strips him of his powers.
A mysterious man who claims to be a product of Lex's latest project plants a bomb on Chloe and uses her to force Lois to get the truth on 33.1 from Lex.
Chloe begins to notice that Clark's not acting like himself. Bizarro enlists the help of Brainiac.
When Green Arrow's band of heroes thwarts his efforts once too often, Lex employs a super-powered vigilante to take down the Emerald Archer.
Lex tracks the amnesiac Kara to Detroit, where Lois follows him. An obsessive busboy infatuated with Kara shoots Lex, and Chloe has to determine whether to heal him or not.
Pete Ross returns to town and finds a number of surprising changes since his departure. Besides resolving his feelings toward Clark since he learned of his friend's secret, Pete has to deal with the acquisition of a superpower of his own.
Clark is kidnapped by a mysterious team of mercenaries, and when Chloe and Lana go to Lionel for help, he expresses his suspicions that Lex is responsible. Chloe and Lana then convince Kara to go with them to the Fortress to ask Jor-El to restore Kara's memory because she's the only person who can rescue Clark.
Clark may have to learn a new superpower as he and Kara join forces to take on Brainiac, putting the lives of their friends in danger.
No one is safe when Lex seeks the secret of Veritas, and Clark tries to stop him.
While Clark seeks out Brainiac to force him to fulfill his side of their bargain and restore Lana, Chloe and Jimmy go up against the government.
When Clark wonders if the world would be better off if he never came to Smallville, Jor-El shows him what life would have been like if he had never existed.
After Lex is attacked by a mysterious stranger, he and Clark both discover the last surviving member of the Veritas group who holds the secret to controlling the Traveler.
Lex goes to the Fortress to fulfill his destiny, while Lana awakens from her coma and Chloe is arrested by the government.