Stardate: 54274.7 - While Voyager stops for maintenance, Harry Kim, Seven and Neelix use the Delta Flyer to search for dilithium, when they come across a war between two alien races. After receiving a distress call from a damaged ship claiming to be on a humanitarian mission, Harry is offered his first chance at commanding a vessel of his own.
While chasing a renegade Maquis ship in the Badlands, the USS Voyager and the Maquis ship they are chasing are pulled into a vortex, which sends them instantly to the Delta Quadrant. However, after the destruction of the device that transported them to the Delta Quadrant, the crew of Voyager and the crew of the Maquis ship must join together to fight their way back to their home in the Alpha quadrant, which is many years away. They will meet many foes and many obstacles along the way, but they will also bond as a crew, between those of the Maquis and those of Starfleet.