Joan is saddened when she learns Rocky (Death Be Not Whatever) has passed away, causing her to further question God about life and death. Will loses his job when his discovery, and whistle blowing, of a political conspiracy causes the town government, and police department, to be desolved. While Luke continues to work on his science project and his growing attraction to Grace and Kevin is injured in a game of basketball.

Following Mustang's tip, Ed and Al travel to Marcoh's village to ask him about the Philosopher's Stone. However, before they are able to learn more about the Stone from the Doctor, they are interrupted by the arrival of Brigadier Basque Gran, who arrests the doctor for desertion during the Eastern War. Ed chases after the General's car, determined not to let the General get away with another cover up. They are all surprised, however, when the car is stopped by the sudden appearance of the Scarred Man.

Jack mounts a rescue mission to free Daniel and Carter is assigned a reconnaisance mission to determine what Anubis' plans are.

As Harm now has custody of Mattie, PO2 Jennifer Coates agrees to move into an apartment down the hall from Harm. Admiral Chegwidden looks into why the diamond he gave to Meredith for their engagement "just doesn't look right".

Gym leader Roxanne teaches at a nearby school as Max decides to enroll and learn a few things.

Ash challenges Roxanne to a gym battle using Pikachu and Treecko against her Rock types.

Baz's condition is bad and it looks unlikely that she'll survive as Nikki does her best to avoid Jim as she tries to contact Andy.