It's the end of the historic Clone Wars, as the forces of darkness have amassed great power in their bid to transform the Republic into the Galactic Empire. With the Republic on a losing streak, Captain Rex fears the Separatists are using stolen data to help predict the Grand Army's every move. As the threat of defeat looms, Rex teams up with experimental Clone Force 99, also known as the Bad Batch. Together, they embark on a high-risk mission behind enemy lines to uncover the truth behind the Separatist victories in "The Bad Batch".

A mysterious live signal leads Jedi General Anakin Skywalker, Captain Rex, and the Bad Batch to a Techno Union facility where they make a shocking discovery! They get more than they bargained for when they find themselves trapped by Separatist forces in "a Distant Echo".

Jedi Anakin Skywalker and the clones escape Wat Tambor's trap and help defend a local village against an attack ordered by Separatist Admiral Trench.

While Jedi Mace Windu and Obi-Wan Kenobi lead an attack against the Separatist forces on Anaxes, the Bad Batch and Anakin Skywalker infiltrate an enemy starship to ensure a Republic victory.

After leaving the Jedi Order, Ahsoka Tano finds herself in the underworld of Coruscant where she befriends aspiring pilot Trace Martez. Enlisted by Trace's sister Rafa to help build dangerous droids, Ahsoka opts to keep her Jedi past a secret in "Gone With a Trace".

Trace makes a rash decision after learning what they are transporting is for the Pyke Syndicate.

Taken prisoner by the Pykes, Ahsoka and the Martez sisters attempt to escape.

Ahsoka bargains for the sisters' freedom and makes a startling discovery.

Anakin and Obi-Wan must decide whether to help Ahsoka pursue Maul or rescue Palpatine.

Ahsoka leads Republic clones to confront Maul's forces on Mandalore, while Maul senses the impending chaos and makes a calculated play to ensure his own survival.

After successfully capturing Maul on Mandalore, Ahsoka plans to deliver him to the Jedi Council on Coruscant. When Order 66 is declared in the midst of her journey, her world is turned upside down. Friends become foes, and enemies become allies.

Ahsoka and Rex must use their wit and skills to survive the turbulent end of the Clone Wars.